CSE 589 Part II

10/11/00


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Table of Contents

CSE 589 Part II

Readings

Two basic paradigms

Example DP Problem: Matrix Chain Multiplication

It really does make a difference

Optimal parenthesization

Dynamic Program for Matrix Chain Multiplication

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DP for Matrix Chain Multiplication

Remarks

Example: Approximate String Matching

Dynamic Program for AST

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DP

To recover actual alignment

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Dynamic Programming Summary

Dynamic Programming Problem Surface Reconstruction

Dynamic Programming Problem Surface Reconstruction

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Graphs

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Definitions

Representing graphs for algorithms

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More Definitions: Assume n = |V|, e = |E|

Tree (undirected)

More definitions

Graph Searching

Breadth First Search (BFS)

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BFS Analysis

BFS Analysis

Consequences of BFS

Consequences of BFS

Consequences of BFS

Breadth First Search (BFS)

Spanning Trees

Breadth First Search (BFS)

Depth-First Search uses stack instead of queue

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DFS Analysis

Consequences of DFS

Most important property of DFS on undirected graphs

Consequences of DFS (cont.)

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Using DFS to get topological sort:

Modify DFS to solve topological sort problem

Consequences of DFS (cont.)

Other Applications of DFS

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Single-Source Shortest Paths (Dijkstra’s algorithm)

Idea of Dijkstra’s Algorithm:

Dijkstra’s Algorithm Assumption: c(u,v) = infinity if (u,v) not in E.

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Why is this algorithm correct?

At all times, for all v, Dist(v) is the length of shortest path from s to v that only goes through vertices in V-U

Run Time Analysis

Most priority queue implementations

Running time of Dijkstra’s algorithm:

Minimum Spanning Trees

Kruskal’s MST algorithm

Correctness

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To implement, use Disjoint Set ADT

Kruskal’s Algorithm with Disjoint Set ADT

Best result

Run-time of Kruskal’s Algorithm

Run-time of Kruskal’s Algorithm

Modeling the Problem

Your turn!!!!

Problems

Problems

Problems

Author:  Anna Karlin

Email: karlin@cs.washington.edu

Home Page: http://www.cs.washington.edu/education/courses/589

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