image University of Washington Computer Science & Engineering
  CSE 590CWi '18:  Reading & Research in Comp. Bio.
  CSE Home   About Us    Search    Contact Info 

 Course Info    CSE 590C is a weekly seminar on Readings and Research in Computational Biology, open to all graduate students in computational, biological, and mathematical sciences.
When/Where: Mondays, 3:30 - 4:50, EE1 031
Organizers: David Haynor, Sreeram Kannan, Su-In Lee, Bill Noble, Larry Ruzzo, Yuliang Wang
Credit: 1-3 Variable
Grading: Credit/No Credit. Talk to the organizers if you are unsure of our expectations.
 Email Course-related announcements and discussions
  Manage Your Subscription List Archives Biology seminar announcements from all around campus
  Manage Your Subscription List Archives Computational biology discussions, conference/job postings, etc.,
  Manage Your Subscription List Archives
 Date  Presenters/Participants Topic Details
01/08---- Organizational Meeting ----
01/22DaveGenerative Models for DNADetails
01/29Damon, ShunfuEmbeddingsDetails
02/05Erin, DanielRNA VelocityDetails
02/12ChethanRepurposing DrugsDetails
02/26SafiyeEmbedding scRNAseqDetails
03/05IanHigh Dim Neural Classification/RegresionDetails
 Papers, etc.

  Note on Electronic Access to Journals

The UW Library is generally a paid subscriber to non-open-access journals we cite. You can freely access these articles from on-campus computers. For off-campus access, follow the "[offcampus]" links below or look at the library "proxy server" instructions. You will be prompted for your UW net ID and password.  

01/08:   -- ---- Organizational Meeting ----

01/15:   -- Holiday

01/22: Generative Models for DNA -- Dave

01/29: Embeddings -- Damon, Shunfu

02/05: RNA Velocity -- Erin, Daniel

02/12: Repurposing Drugs -- Chethan

02/19:   -- Holiday

02/26: Embedding scRNAseq -- Safiye

03/05: High Dim Neural Classification/Regresion -- Ian

 Other Papers Other suggested topics/papers that didn't fit the schedule:
 Other Seminars Past quarters of CSE 590C
COMBI & Genome Sciences Seminars
Biostatistics Seminars
Microbiology Department Seminars
 Resources Molecular Biology for Computer Scientists, a primer by Lawrence Hunter (46 pages)
A Quick Introduction to Elements of Biology, a primer by Alvis Brazma et al.
A comprehensive FAQ at, including annotated links to online tutorials and lectures.
CSE 527: Computational Biology
CSEP 590A: Computational Biology (Professional Masters Program)
Genome 540/541: Introduction to Computational Molecular Biology: Genome and Protein Sequence Analysis

CSE's Computational Molecular Biology research group
Interdisciplinary Ph.D. program in Computational Molecular Biology

CSE logo Computer Science & Engineering
University of Washington
Box 352350
Seattle, WA  98195-2350
(206) 543-1695 voice, (206) 543-2969 FAX