image University of Washington Computer Science & Engineering
  CSE 428,  Sp '12:  Approximate Schedule
  CSE Home   About Us    Search    Contact Info 

Schedule details will evolve as we go; check back periodically to see the latest updates.

    Due Lecture Topic Reading
Week 1
1/-1/4		 Tu   Introduction & Overview  
Th
Week 2
1/7-1/11		 Tu  
Th
Week 3
1/14-1/18		 Tu    
Th
Week 4
1/21-1/25		 Tu  
Th
Week 5
1/28-2/1		 Tu  
Th
Week 6
2/4-2/8		 Tu  
Th
Week 7
2/11-2/15		 Tu  
Th
Week 8
2/18-2/22		 Tu  
Th
Week 9
2/25-2/29		 Tu  
Th
Week 10
3/3-3/7		 Tu  
Th

References:  As we go forward, I will be updating this list and explicitly designating some of these papers as assigned reading. The rest are optional---good supplementary references, recommended if you want more depth in any of the areas.

Most links below take you to PubMed, the NIH bibliographic database. Usually, but counterintuitively, from a PubMed abstract you click the icon of the publisher (or sometimes the icon saying "UW article online") to get to the actual article.

padlock  Electronic access to journals is generally free from on-campus computers. For off-campus access, follow the "[offcampus]" links or look at the library "proxy server" instructions.  padlock

References -- Introduction & Overview:

  1. Wetterstrand KA. DNA Sequencing Costs: Data from the NHGRI Large-Scale Genome Sequencing Program. Available at: http://www.genome.gov/sequencingcosts/ Accessed 30 Mar 2012.
  2. Missing Lincs: Lesser-known genetic material helps explain why humans are human, Science News, Dec 2011 http://www.sciencenews.org/view/feature/id/336570/title/Missing_Lincs [offcampus]
  3. WS Noble, "A quick guide to organizing computational biology projects." PLoS Comput. Biol., 5, #7 (2009) e1000424. [offcampus]
CSE logo Computer Science & Engineering
University of Washington
Box 352350
Seattle, WA  98195-2350
(206) 543-1695 voice, (206) 543-2969 FAX