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The goal of the course project is to write software that will start with a set of homologous genes from multiple bacteria and identify evolutionarily conserved motifs in their DNA regulatory regions. The navigation links at the left give details about how you might go about it by hand; you should become familiar with those first. The links below then give details about the local installation to be used for automating the process.
Details of local installation: |
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Computer Science & Engineering University of Washington Box 352350 Seattle, WA 98195-2350 (206) 543-1695 voice, (206) 543-2969 FAX [comments to tompa] |