| Papers, etc. |
Note on Electronic Access to Journals
Links to full papers below are often to journals that require a
paid subscription. The UW Library is generally a paid
subscriber, and you can freely access these articles if you do
so from an on-campus computer. For off-campus access,
follow the "[offcampus]" links below or
look at the
library "proxy server" instructions.
You will be prompted for your UW net ID and password once per
session.
10/04: ---- Organizational Meeting ----
10/11: Selection in the Dog genome -- Eric, Kris; Tompa
- JM Akey, AL Ruhe, DT Akey, AK Wong, CF Connelly, J Madeoy, TJ Nicholas, MW Neff, "Tracking footprints of artificial selection in the dog genome." Proc. Natl. Acad. Sci. U.S.A., 107, #3 (2010) 1160-5.
[offcampus]
10/18: Mass Defect Filters -- Brandon; Noble
10/25: lincRNA -- Eric, Elizabeth; Ruzzo
- M Guttman, I Amit, M Garber, C French, MF Lin, D Feldser, M Huarte, O Zuk, BW Carey, JP Cassady, MN Cabili, R Jaenisch, TS Mikkelsen, T Jacks, N Hacohen, et 5 al., "Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals." Nature, 458, #7235 (2009) 223-7.
[offcampus]
- M Guttman, M Garber, JZ Levin, J Donaghey, J Robinson, X Adiconis, L Fan, MJ Koziol, A Gnirke, C Nusbaum, JL Rinn, ES Lander, A Regev, "Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs." Nat. Biotechnol., 28, #5 (2010) 503-10.
[offcampus]
11/01: Chimeric Mass Spectra -- Benjamin; Noble
11/08: Tumorigenesis -- Xiaoyu, Stella; Noble
- E Letouzé, Y Allory, MA Bollet, F Radvanyi, F Guyon, "Analysis of the copy number profiles of several tumor samples from the same patient reveals the successive steps in tumorigenesis." Genome Biol., 11, #7 (2010) R76.
[offcampus]
11/15: ChIPseq Statistics -- Dustin; Bolouri
- Unpublished paper by Gottardo, available soon
11/22: Pathways from Interactions -- James; Lee
11/29: Metagenomics -- Stella; Borenstein
Some combination of:
- TA Gianoulis, J Raes, PV Patel, R Bjornson, JO Korbel, I Letunic, T Yamada, A Paccanaro, LJ Jensen, M Snyder, P Bork, MB Gerstein, "Quantifying environmental adaptation of metabolic pathways in metagenomics." Proc. Natl. Acad. Sci. U.S.A., 106, #5 (2009) 1374-9.
[offcampus]
12/06: von Neuman rejection sampling -- Miles, Dustin; Felsenstein
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