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| What is DNA sequence |
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| alignment? |
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| • | Match
2 sequences, with underscore ( _ ) |
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| wildcards. |
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| • | Best
Alignment à minimum underscores |
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| (slight
simplification, but okay for 326) |
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| • | e.g. |
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| Best
alignment: |
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| (3 underscores) |
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| A_CCCGTTT |
| _TCCC_TTT |